Taxonomy browser Taxonomy Browser (Nitrosopumilus maritimus SCM1)

Entrez records
Database name	Direct links	Subtree links	Links from type
BioProject	12	12	-
BioSample	26	26	-
GEO DataSets	20	20	-
Gene	2,057	2,057	-
Identical Protein Groups	2,187	2,187	-
Nucleotide	7	7	7
PMC	31	31	-
Protein	3,912	3,912	-
SRA	27	27	-
Structure	20	20	-
Taxonomy	1	1	-

Nitrosopumilus maritimus SCM1

Taxonomy ID: 436308 (for references in articles please use ncbitaxon:436308)

current name

Nitrosopumilus maritimus SCM1

equivalent:

Nitrosopumilus maritimus str. SCM1

Nitrosopumilus maritimus strain SCM1

NCBI BLAST name: archaea
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym Seattle Aquarium strain SCM1

Lineage(full): cellular organisms; Archaea; Thermoproteati; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus; Nitrosopumilus maritimus

Comments and References:

genome sequence

Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Walker CB et al. (2010)

Walker, C.B., de la Torre, J.R., Klotz, M.G., Urakawa, H., Pinel, N., Arp, D.J., Brochier-Armanet, C., Chain, P.S., Chan, P.P., Gollabgir, A., Hemp, J., Hugler, M., Karr, E.A., Konneke, M., Shin, M., Lawton, T.J., Lowe, T., Martens-Habbena, W., Sayavedra-Soto, L.A., Lang, D., Sievert, S.M., Rosenzweig, A.C., Manning, G., and Stahl, D.A. "Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea." Proc. Natl. Acad. Sci. USA (2010) 107:8818-8823.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Nitrosopumilus maritimus type strain (BD-ID 141102)	meta-databases	BacDive
Nitrosopumilus maritimus SCM1	organism-specific	BioCyc
Nitrosopumilus maritimus SCM1	organism-specific	BioCyc
Nitrosopumilus maritimus SCM1	organism-specific	BioCyc
GOLD: Go0002333	organism-specific	Genomes On Line Database
641228499: Nitrosopumilus maritimus SCM1	organism-specific	Integrated Microbial Genomes
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.