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Taxonomy browser (Panicum virgatum)

Panicum virgatum

Taxonomy ID: 38727 (for references in articles please use NCBI:txid38727)
current name
Panicum virgatum L., 1753
Genbank common name: switchgrass
NCBI BLAST name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,338,184 1,338,166
Protein 219,173 219,156
Structure 11 11
Genome 1 1
Popset 99 99
GEO Datasets 374 374
PubMed Central 1,770 1,770
Gene 74,981 74,981
SRA Experiments 13,629 13,629
Identical Protein Groups 143,607 143,606
BioProject 7,357 7,357
BioSample 12,936 12,936
Assembly 1 1
PubChem BioAssay 3 3
Taxonomy 2 1

Comments and References:

image:Panicum virgatum
TROPICOS (Feb 28, 2018)
Name accessed on 28 February 2018 in: Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at:
Soreng RJ et al. 2003 & on
Soreng RJ, G Davidse, PM Peterson, FO Zuloaga, EJ Judziewicz, TS Filgueiras & O Morrone 2003 and onwards. On-line taxonomic novelties and updates, distributional additions and corrections, and editorial changes since the four published volumes of the Catalogue of New World Grasses (Poaceae) published in Contributions from the United States National Herbarium Vols. 39, 41, 46, and 48. Internet Catalogue of New World Grasses
Zuloaga FO et al. 2018, doi:10.1371/journal.pone.0191529
Zuloaga FO, Salariato DL and Scataglini A. 2018. Molecular phylogeny of Panicum s. str. (Poaceae, Panicoideae, Paniceae) and insights into its biogeography and evolution. PLoS ONE 13 (2), e0191529 (2018)

Genome Information

Go to NCBI genomic BLAST page for Panicum virgatum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Panicum virgatum taxonomy taxonomy/phylogenetic Arctos Specimen Database
dryaddb supplemental materials Dryad Digital Repository
Panicum virgatum L. taxonomy/phylogenetic Encyclopedia of life
3269 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2614208536: Panicum virgatum AP13 organism-specific Integrated Microbial Genomes
Panicum virgatum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Panicum virgatum taxonomy/phylogenetic Lifemap
Panicum virgatum Linnaeus, 1753 taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from this provider taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Panicum virgatum (L.) herbarium/museum collections PlantaeDB, University of Bucharest
Panicum virgatum taxonomy/phylogenetic Plants of the World Online
plazi taxonomy/phylogenetic Plazi
Panicum virgatum taxonomy/phylogenetic The International Plant Names Index
Panicum virgatum taxonomy/phylogenetic TreeBase
Panicum virgatum L. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Panicum virgatum organism-specific WebScipio - eukaryotic gene identification
Panicum virgatum Linnaeus, 1753 taxonomy/phylogenetic World Register of Marine Species
diArk: Panicum virgatum organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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