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Taxonomy browser (Fervidobacterium nodosum Rt17-B1)

Fervidobacterium nodosum Rt17-B1

Taxonomy ID: 381764 (for references in articles please use NCBI:txid381764)
Scientific name: Fervidobacterium nodosum Rt17-B1
equivalent: Fervidobacterium nodosum str. Rt17-B1
equivalent: Fervidobacterium nodosum strain Rt17-B1
NCBI BLAST® name: thermotogales
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Thermotogae; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium; Fervidobacterium nodosum
   Entrez records   
Database name Direct links
Nucleotide 9
Protein 3,680
Structure 4
Genome 1
GEO Datasets 3
Gene 1,848
SRA Experiments 2
Identical Protein Groups 1,918
Bio Project 3
Bio Sample 2
Bio Systems 122
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentZhaxybayeva O et al. (2009)
Zhaxybayeva, O., Swithers, K.S., Lapierre, P., Fournier, G.P., Bickhart, D.M., Deboy, R.T., Nelson, K.E., Nesbo, C.L., Doolittle, W.F., Gogarten, J.P., and Noll, K.M. "On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales." Proc. Natl. Acad. Sci. USA (2009) 106:5865-5870.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
382,741 25,764 408,505
Totals per type
382,741 25,764 408,505

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Fervidobacterium nodosum meta-databases BacDive
Fervidobacterium nodosumRt17-B1 organism-specific BioCyc
GOLD: Go0000072 organism-specific Genomes On Line Database
640753026: Fervidobacterium nodosum Rt17-B1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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