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Taxonomy browser (Thiomonas delicata)

Thiomonas delicata

Taxonomy ID: 364030 (for references in articles please use NCBI:txid364030)
Scientific name: Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 emend. Battaglia-Brunet et al. 2011
current: Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 emend. Katayama et al. 2006
type strain of Thiomonas delicata: DSM:17897
type strain of Thiomonas delicata: KCTC:2851
type strain of Thiomonas delicata: NBRC:14566
type strain of Thiomonas delicata: personal::THI 091
Inherited blast name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: Thiobacillus delicatus (ex Mizoguchi et al. 1976) Katayama-Fujimura et al. 1984
synonym: "Thiobacillus cuprinus" Huber and Stetter 1990, effective name 1)
synonym: "Thiomonas arsenivorans" Battaglia-Brunet et al. 2006, effective name 1)
  type strain of "Thiomonas arsenivorans": DSM:16361
type strain of "Thiomonas arsenivorans": BCCM/LMG:22795
type strain of "Thiomonas arsenivorans": personal::b6
synonym: Thiomonas cuprina Moreira and Amils 1997 emend. Kelly et al. 2007
  type strain of Thiomonas cuprina: DSM:5495
type strain of Thiomonas cuprina: NBRC:102094
type strain of Thiomonas cuprina: NBRC:102145
type strain of Thiomonas cuprina: personal::H5
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; unclassified Burkholderiales; Burkholderiales Genera incertae sedis; Thiomonas
   Entrez records   
Database name Direct links
Nucleotide 205
Protein 7,165
Genome 1
Popset 8
PubMed Central 28
Protein Clusters 3
Identical Protein Groups 4,435
Bio Project 2
Bio Sample 1
Assembly 1
Taxonomy 1

Notes:

Comments and References:

Associate Editor IJSB (1997) (Thiomonas curpina)
Associate Editor, IJSB "Notification that new names and new combinations have appeared in volume 47, No. 2, of the IJSB (footnote d)." Int. J. Syst. Bacteriol. (1997) 47:917-919. [Note: the name is 'sp. nov.' rather than 'comb. nov.']

Reference to PubMed documentBattaglia-Brunet F et al. (2006)
Battaglia-Brunet, F., Joulian, C., Garrido, F., Dictor, M.-C., Morin, D., Coupland, K., Johnson, D.B., Halberg, K.B., and Baranger, P. "Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov." Antonie van Leeuwenhoek (2006) 89:99-108. Published online 8 December 2005.

Reference to PubMed documentBattaglia-Brunet F et al. (2011)
Battaglia-Brunet, F., El Achbouni, H., Quemeneur, M., Hallberg, K.B., Kelly, D.P., and Joulian, C. "Proposal that the arsenite-oxidizing organisms Thiomonas cuprina and 'Thiomonas arsenivorans' be reclassified as strains of Thiomonas delicata, and emended description of Thiomonas delicata." Int. J. Syst. Evol. Microbiol. (2011) 61:2816-2821.

Reference to PubMed documentHuber H & Stetter KO (1990)
Huber, H., Stetter, K.O. "Thiobacillus cuprinus sp. nov., a novel facultatively organotrophic metal-mobilizing bacterium." Appl. Environ. Microbiol. (1990) 56:315-322.

Reference to PubMed documentKatayama Y et al. (2006)
Katayama, Y., Uchino, Y., Wood, A.P., and Kelly, D.P. "Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus." Int. J. Syst. Evol. Microbiol. (2006) 56:2553-2557.

Nota BeneKatayama-Fjuimura Y et al. (1984)
Katayama-Fujimura, Y., Kawashima, I., Tsuzaki, N., and Kuraishi, H. "Physiological characteristics of the facultatively chemolithotrophic Thiobacillus species Thiobacillus delicatus nom. rev., emend., Thiobacillus perometabolis, and Thiobacillus intermedius." Int. J. Syst. Bacteriol. (1984) 34:139-144. [No PubMed record available.]

Kelly DP & Wood AP (2005b)
Kelly, D.P., and Wood, A.P. "Genus Incertae Sedis XVIII. Thiomonas Moreira and Amils 1997, 527VP." In: D.J. Brenner, N.R. Krieg, J.T. Staley and G. M. Garrity (eds), Bergeys Manual of Systematic Bacteriology, second edition, vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer, New York, 2005, pp. 757-759. [No PubMed record available.]

Reference to PubMed documentKelly DP et al. (2007)
Kelly, D.P., Uchino, Y., Huber, H., Amils, R., and Wood, A.P. "Reassessment of the phylogenetic relationships of Thiomonas cuprina." Int. J. Syst. Evol. Microbiol. (2007) 57:2720-2724.

Mizoguchi T et al. (1976)
Mizoguchi, T., Sato, T., and Okabe, T. "New sulfur-oxidizing bacteria capable of growing heterotrophically, Thiobacillus rubellus nov. sp. and Thiobacillus delicatus nov. sp." J. Ferment. Technol. (1976) 54:181-191. [No PubMed record available.]

Reference to PubMed documentMoreira D & Amils R (1997)
Moreira, D., and Amils, R. "Phylogeny of Thiobacillus cuprinus and other mixotrophic thiobacilli: proposal for Thiomonas gen. nov." Int. J. Syst. Bacteriol. (1997) 47:522-528.

Reference to PubMed documentVALIDATION LIST No. 109 (2006)
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:925-927.


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thiomonas delicata meta-databases BacDive
Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
Thiomonas delicata (taxon passport) culture/stock collections StrainInfo
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