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Taxonomy browser (Magnoliopsida)


Taxonomy ID: 3398 (for references in articles please use NCBI:txid3398)
current name
Genbank common name: flowering plants
NCBI BLAST name: flowering plants
Rank: class
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
heterotypic synonym
common name(s) angiosperms
blast name
flowering plants
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta
   Entrez records   
Database name Subtree links Direct links
Nucleotide 89,134,843 3
Protein 31,836,222 3
Structure 6,685 -
Genome 1,662 -
Popset 51,458 909
Conserved Domains 992 304
GEO Datasets 247,389 -
PubMed Central 782,664 17,788
Gene 9,545,634 -
HomoloGene 11,871 -
SRA Experiments 1,846,439 40
GEO Profiles 3,534,131 -
Protein Clusters 61,364 -
Identical Protein Groups 22,989,144 2
BioProject 112,811 11
BioSample 1,738,197 47
Assembly 4,507 -
PubChem BioAssay 10,602 -
Taxonomy 228,835 1

Comments and References:

APG IV (2016), doi:10.1111/boj.12385
The Angiosperm Phylogeny Group. 2016. An update of the Angiosperm Phylogeny Group classification of the orders and families of flowering plants: APG IV. Botanical Journal of the Linnean Society 181: 1-20.
APG III (2009), doi:10.1111/j.1095-8339.2009.00996.x
The Angiosperm Phylogeny Group. 2009. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society 161(2): 105-121. The APG III system incorporates molecular data and phylogenetic methods and represents the most up-to-date classification of flowering plants.
APG I (1998)
The Angiosperm Phylogeny Group. 1998. An ordinal classification for the families of flowering plants. Annals of the Missouri Botanical Garden 85: 531-53.
Zeng L et al. 2014, doi:10.1038/ncomms5956
Zeng L, Zhang Q, Sun R, Kong H, Zhang N, Ma H. 2014. Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of divergence times. Nature Communications 5: 4956.
Ruhfel BR et al. 2014, doi:10.1186/1471-2148-14-23
Ruhfel BR, Gitzendanner MA, Soltis PS, Soltis DE and Burleigh HG. 2014. From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes. BMC Evolutionary Biology 14:23
Soltis DE et al. 2011
Soltis DE, Smith SA, Cellinese N, Wurdack KJ, Tank DC, Brockington SF, Refulio-Rodriguez NF, Walker JB, Moore MJ, Carlsward BS, Bell CD, Latvis M, Crawley S, Black C, Diouf D, Xi Z, Rushworth CA, Gitzendanner MA, Sytsma KJ, Qiu YL, Hilu KW, Davis CC, Sanderson MJ, Beaman RS, Olmstead RG, Judd WS, Donoghue MJ, Soltis PS. 2011. Angiosperm phylogeny: 17 genes, 640 taxa. American Journal of Botany 98: 704-740.
Stevens PF: Angiosperm Phylogeny Website
Stevens, P. F. (2001 onwards). Angiosperm Phylogeny Website. Version 12, July 2012 [and more or less continuously updated since].

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
3 records from this provider taxonomy/phylogenetic Arctos Specimen Database
2 records from this provider taxonomy/phylogenetic Barcodes of Life
7 records from this provider supplemental materials Dryad Digital Repository
Magnoliophyta taxonomy/phylogenetic Encyclopedia of life
Magnoliophyta taxonomy/phylogenetic Lifemap
Magnoliophyta images MorphBank
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Magnoliopsida taxonomy/phylogenetic Ocean Biogeographic Information System
Angiosperms taxonomy/phylogenetic Tree of Life
2 records from this provider taxonomy/phylogenetic TreeBase
Magnoliopsida taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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