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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 383 383 -
BioSample 2,183 2,183 -
Conserved Domains 2 7 -
GEO DataSets 533 533 -
Gene 61,916 61,917 -
Identical Protein Groups 33,406 33,406 -
Nucleotide 618,882 618,882 -
PMC 6,916 6,916 -
Protein 49,641 49,641 -
SRA 2,232 2,232 -
Structure 45 45 -
Taxonomy 1 1 -

Physcomitrium patens

Taxonomy ID: 3218 (for references in articles please use ncbitaxon:3218)
current name
Physcomitrium patens  (Hedw.) Mitt., 1851
homotypic synonym:
Physcomitrella patens  (Hedw.) Bruch & Schimp., 1849
Physcomitrella patens subsp. patens
basionym:
Phascum patens  Hedw., 1801
NCBI BLAST name: mosses
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Lineage(full)
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium

Comments and References:

image:Physcomitrium patens
Image by Pirex from Wikimedia Commons under a Public Domain license.
* Image may not have been verified for accuracy by NCBI Taxonomy.
FNA - Physcomitrella
Goffinet B. 2007. Physcomitrella Bruch & Schimper, Bryol. Europ. 1: 13. 1849. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 27: Bryophytes: Mosses, Part 1. New York and Oxford. On-line version.
FNA - Funariaceae
McIntosh TT. 2007. Funariaceae Schaewgrichen. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Vol. 27: Bryophytes: Mosses, Part 1. New York and Oxford. On-line version.
Beike AK et al. 2014
Beike AK, Von Stackelberg M, Hanke ST, Follo M, Quandt D, McDaniel S, Reski R, Tan BC, Frahm J-P and Rensing SA. 2014. Molecular evidence for convergent evolution and allopolyploid speciation within the Physcomitrium-Physcomitrella species complex. BMC Evolutionary Biology 14 (1), 158.
Medina R et al. (2019)
Medina R, Johnson MG, Liu Y, Wickett NJ, Shaw AJ, Goffinet B. 2019. Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella, Physcomitridium and Aphanorrhegma. Journal of Systematics Evolution 57(4):404-417.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Physcomitrella patens taxonomy taxonomy/phylogenetic Arctos Specimen Database
Physcomitrella patens Bruch & W. P. Schimper in B. S. G., 1849 taxonomy/phylogenetic Encyclopedia of life
GOLD: 5 Organisms organism-specific Genomes On Line Database
2614208531: Physcomitrella patens patens 2 (version 3) organism-specific Integrated Microbial Genomes
649410504: Physcomitrella patens patens (version 2) organism-specific Integrated Microbial Genomes
Physcomitrella patens (Hedw.) Bruch & Schimp. in B.S.G. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Physcomitrella patens taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Physcomitrium patens ((Hedw.) Mitt.) herbarium/museum collections PlantaeDB, University of Bucharest
Physcomitrella patens taxonomy/phylogenetic TreeBase
WebScipio: Physcomitrella patens organism-specific WebScipio - eukaryotic gene identification
diArk: Physcomitrella patens organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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