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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 2 2 -
BioSample 2 2 -
Gene 13,689 13,689 -
Identical Protein Groups 8,189 8,189 -
Nucleotide 20 20 -
Protein 13,772 13,772 -
Structure 12 12 -
Taxonomy 1 1 -

Rhizobium rhizogenes K84

Taxonomy ID: 311403 (for references in articles please use ncbitaxon:311403)
current name
Rhizobium rhizogenes K84
equivalent:
Agrobacterium radiobacter K84
Rhizobium radiobacter K84
Agrobacterium tumefaciens K84
includes:
Agrobacterium rhizogenes K84
NCBI BLAST name: a-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Martinezella; Martinezella rhizogenes

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Slater SC et al. (2009)
Slater, S.C., Goldman, B.S., Goodner, B., Setubal, J.C., Farrand, S.K., Nester, E.W., Burr, T.J., Banta, L., Dickerman, A.W., Paulsen, I., Otten, L., Suen, G., Welch, R., Almeida, N.F., Arnold, F., Burton, O.T., Du, Z., Ewing, A., Godsy, E., Heisel, S., Houmiel, K.L., Jhaveri, J., Lu, J., Miller, N.M., Norton, S., Chen, Q., Phoolcharoen, W., Ohlin, V., Ondrusek, D., Pride, N., Stricklin, S.L., Sun, J., Wheeler, C., Wilson, L., Zhu, H., and Wood, D.W. "Genome sequences of three Agrobacterium biovars help elucidate the evolution of multi-chromosome genomes in bacteria." J. Bacteriol. (2009) 191:2501-2511.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhizobium rhizogenes type strain (BD-ID 13571) meta-databases BacDive
Agrobacterium radiobacter K84 organism-specific BioCyc
Agrobacterium radiobacter K84 organism-specific BioCyc
Rhizobium rhizogenes K84 organism-specific BioCyc
Agrobacterium radiobacter K84 organism-specific BioCyc
GOLD: Go0000930 organism-specific Genomes On Line Database
643348504: Agrobacterium radiobacter K84 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Rhizobium rhizogenes type strain (SI-ID 443) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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