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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 9 9 -
BioSample 9 9 -
Identical Protein Groups 31,610 31,610 -
Nucleotide 372 372 184
PMC 3 3 -
Protein 40,773 40,773 -
SRA 2 2 -
Taxonomy 1 1 -

Alloyangia pacifica

Taxonomy ID: 311180 (for references in articles please use NCBI:txid311180)
current name
Alloyangia pacifica  (Dai et al. 2006) Deshmukh and Oren 2023 in [Deshmukh UB & Oren A (2023e)]
basionym:
Yangia pacifica  Dai et al. 2006 , nom. illeg.  1) in [Dai X et al. (2006)]
type strain of Yangia pacifica: personal : DX5-10 , CGMCC : 1.3455 , JCM : 12573 , DSM : 26894
homotypic synonym:
Yangia pacifica  Dai et al. 2006 emend. Verma et al. 2021 in [Verma A et al. (2021)]
includes:
alpha proteobacterium DX5-10
homotypic synonym:
Salipiger pacificus  (Dai et al. 2006) Hördt et al. 2020 in  in  [Validation List No. 194 (2020)] , [Hördt A et al. (2020)]
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Alloyangia

Notes:

Comments and References:
Dai X et al. (2006) , Pubmed: abstract
Dai, X., Wang, B.-J., Yang, Q.-X., Jiao, N.-Z., and Liu, S.-J. "Yangia pacifica gen. nov., sp. nov., a novel member of the Roseobacter clade from coastal sediment of the East China Sea." Int. J. Syst. Evol. Microbiol. (2006) 56(Pt 3):529-533.
Verma A et al. (2021) , Pubmed: abstract
Verma, A., Sundharam, S.S., Pal, Y., Bisht, B., Yadav, P., and Krishnamurthi, S. "Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006." Int. J. Syst. Evol. Microbiol. (2021) 71(9):005021.
Validation List No. 194 (2020) , Pubmed: abstract
Validation List No. 194: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2020) 70(7):4043-4049.
Hördt A et al. (2020) , doi: 10.3389/fmicb.2020.00468 , Pubmed: abstract
Hördt, A., López, M.G., Meier-Kolthoff, J.P., Schleuning, M., Weinhold, L.-M., Tindall, B.J., Gronow, S., Kyrpides, N.C., Woyke, T., and Göker, M. "Analysis of 1,000+ type-strain genomes substantially improves taxonomic classification of Alphaproteobacteria." Front. Microbiol. (2020) 11:468.
Deshmukh UB & Oren A (2023e) , Pubmed: abstract
Deshmukh, U.B., and Oren, A. "Proposal of Thalassovita gen. nov. and Alloyangia gen. nov. as replacement names for the illegitimate prokaryotic generic names Thalassobius and Yangia, respectively." Int. J. Syst. Evol. Microbiol. (2023) 73(9):006025.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alloyangia pacifica type strain (BD-ID 23231) meta-databases BacDive
Yangia pacifica YSBP01 organism-specific BioCyc
Yangia pacifica CGMCC 1.3455 organism-specific BioCyc
Yangia pacifica DSM 26894 organism-specific BioCyc
Yangia pacifica DSM 26894 organism-specific BioCyc
Yangia pacifica YSBP01 organism-specific BioCyc
Yangia pacifica CGMCC 1.3455 organism-specific BioCyc
Yangia pacifica DSM 26894 organism-specific BioCyc
Yangia pacifica YSBP01 organism-specific BioCyc
Yangia pacifica CGMCC 1.3455 organism-specific BioCyc
Yangia pacifica CGMCC 1.3455 organism-specific BioCyc
Yangia pacifica DSM 26894 organism-specific BioCyc
Yangia pacifica YSBP01 organism-specific BioCyc
Yangia pacifica Dai et al. 2006 taxonomy/phylogenetic Encyclopedia of life
GOLD: 7 Organisms organism-specific Genomes On Line Database
Yangia pacifica culture/stock collections Global Catalogue of Microorganisms
2617270881: Yangia pacifica CGMCC 1.3455 organism-specific Integrated Microbial Genomes
2619618962: Yangia pacifica DSM 26894 organism-specific Integrated Microbial Genomes
2832936583: Yangia pacifica YSBP01 organism-specific Integrated Microbial Genomes
8063073528: Salipiger pacificus AcN7-15 organism-specific Integrated Microbial Genomes
8063078606: Salipiger pacificus KcN7-14 organism-specific Integrated Microbial Genomes
Yangia pacifica Dai, Wang, Yang, Jiao & Liu, 2006 taxonomy/phylogenetic Ocean Biogeographic Information System
Alloyangia pacifica (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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