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Taxonomy browser (Paraburkholderia xenovorans LB400)

Paraburkholderia xenovorans LB400

Taxonomy ID: 266265 (for references in articles please use NCBI:txid266265)
Scientific name: Paraburkholderia xenovorans LB400
NCBI BLAST® name: b-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym: Burkholderia cepacia LB400
heterotypic synonym: Burkholderia fungorum LB400
heterotypic synonym: Burkholderia sp. LB400
heterotypic synonym: Burkholderia xenovorans LB400
heterotypic synonym: Pseudomonas LB400
heterotypic synonym: Pseudomonas sp. (strain LB400)
heterotypic synonym: Pseudomonas sp. LB400
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia; Paraburkholderia xenovorans
   Entrez records   
Database name Direct links
Nucleotide 685
Protein 27,077
Structure 83
Genome 1
Popset 1
GEO Datasets 8
PubMed Central 23
Gene 10,156
SRA Experiments 3
Identical Protein Groups 10,992
Bio Project 3
Bio Sample 2
Bio Systems 551
Assembly 2
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentChain PS et al. (2006)
Chain, P.S., Denef, V.J., Konstantinidis, K.T., Vergez, L.M., Agullo, L., Reyes, V.L., Hauser, L., Cordova, M., Gomez, L., Gonzalez, M., Land, M., Lao, V., Larimer, F., Lipuma, J.J., Mahenthiralingam, E., Malfatti, S.A., Marx, C.J., Parnell, J.J., Ramette, A., Richardson, P., Seeger, M., Smith, D., Spilker, T., Sul, W.J., Tsoi, T.V., Ulrich, L.E., Zhulin, I.B., and Tiedje, J.M. "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility." Proc. Natl. Acad. Sci. USA (2006) 103:15280-15287.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
270,915 270,915
Totals per type
270,915 270,915

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Paraburkholderia xenovorans meta-databases BacDive
Paraburkholderia xenovoransLB400 organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
3 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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