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Taxonomy browser (Rhodopseudomonas palustris CGA009)

Rhodopseudomonas palustris CGA009

Taxonomy ID: 258594 (for references in articles please use NCBI:txid258594)
current name
Rhodopseudomonas palustris CGA009
NCBI BLAST name: a-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas; Rhodopseudomonas palustris
   Entrez records   
Database name Direct links
Nucleotide 593
Protein 11,787
Structure 87
Genome 1
GEO Datasets 32
PubMed Central 19
Gene 9,969
SRA Experiments 51
Identical Protein Groups 5,912
BioProject 12
BioSample 48
Assembly 2
PubChem BioAssay 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Larimer FW et al. (2004)
Larimer, F.W., Chain, P., Hauser, L., Lamerdin, J., Malfatti, S., Do, L., Land, M.L., Pelletier, D.A., Beatty, J.T., Lang, A.S., Tabita, F.R., Gibson, J.L., Hanson, T.E., Bobst, C., Torres, J.L., Peres, C., Harrison, F.H., Gibson, J., and Harwood, C.S. "Complete genome sequence of the metabolically versatile photosynthetic bacterium Rhodopseudomonas palustris." Nat Biotechnol. (2004) 22(1):55-61.
Mazny BE et al. (2023), doi:10.1128/mra.01285-22
Mazny, B.E., Sheff, O.F., LaSarre, B., McKinlay, A., and McKinlay, J.B. "Complete genome sequence of Rhodopseudomonas palustris CGA0092 and corrections to the R. palustris CGA009 genome sequence." Microbiol. Resour. Announc. (2023) 12(5):e01285-22.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhodopseudomonas palustris CGA009 organism-specific BioCyc
GOLD: Go0072558 organism-specific Genomes On Line Database
637000239: Rhodopseudomonas palustris CGA009 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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