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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 56 56 -
BioSample 2,180 2,180 -
Gene 2,753 2,753 -
Identical Protein Groups 44,523 44,523 -
Nucleotide 36,625 36,625 4
PMC 68 68 -
Protein 46,546 46,546 -
SRA 10 10 -
Taxonomy 1 1 -

Alistipes communis

Taxonomy ID: 2585118 (for references in articles please use ncbitaxon:2585118)
current name
Alistipes communis  Sakamoto et al. 2020 in [Sakamoto M et al. (2020)]
type strain of Alistipes communis: personal : 5CBH24 , JCM : 32850 , DSM : 108979
includes:
Alistipes sp. 5CBH24
Alistipes sp. 6CPBBH3
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym "Alistipes obesi"  Hugon et al. 2013 , effective name  1)
type strain of Alistipes obesi: personal : ph8 , CSUR : P186 , DSM : 25724
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes

Notes:

Comments and References:

Sakamoto M et al. (2020) , Pubmed: abstract
Sakamoto, M., Ikeyama, N., Ogata, Y., Suda, W., Iino, T., Hattori, M., and Ohkuma, M. "Alistipes communis sp. nov., Alistipes dispar sp. nov. and Alistipes onderdonkii subsp. vulgaris subsp. nov., isolated from human faeces, and creation of Alistipes onderdonkii subsp. onderdonkii subsp. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):473-480.
Hugon P et al. (2013)
Hugon, P., Ramasamy, D., Lagier, J.-C., Rivet, R., Couderc, C., Raoult, D., and Fournier, P.-E. "Non contiguous-finished genome sequence and description of Alistipes obesi sp. nov." Stand. Genomic Sci. (2013) 7:427-439.
Lagier JC et al. (2012b)
Lagier, J.-C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., Trape, J.-F., Koonin, E.V., La Scola, B., and Raoult, D. "Microbial culturomics: paradigm shift in the human gut microbiome study." Clin. Microbiol. Infect. (2012) 18(12):1185-1193.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alistipes communis type strain (BD-ID 159608) meta-databases BacDive
Alistipes sp. 5CBH24 5CBH24 organism-specific BioCyc
Alistipes sp. 5CBH24 ph8 organism-specific BioCyc
Alistipes sp. 5CBH24 ph8 organism-specific BioCyc
Alistipes sp. 5CBH24 5CBH24 organism-specific BioCyc
Alistipes sp. 5CBH24 ph8 organism-specific BioCyc
Alistipes sp. 5CBH24 5CBH24 organism-specific BioCyc
GOLD: 6 Organisms organism-specific Genomes On Line Database
2547132153: Alistipes obesi ph8 organism-specific Integrated Microbial Genomes
8067826880: Alistipes communis D43t1_170807_E1 organism-specific Integrated Microbial Genomes
8067823973: Alistipes communis 6CPBBH3 organism-specific Integrated Microbial Genomes
8067821124: Alistipes communis DFI.6.39 organism-specific Integrated Microbial Genomes
8067829347: Alistipes communis 5CBH24 organism-specific Integrated Microbial Genomes
8067832153: Alistipes communis MGYG-HGUT-01415 organism-specific Integrated Microbial Genomes
Alistipes communis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Alistipes communis type strain (SI-ID 404981) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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