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Taxonomy browser (Alistipes communis)

Alistipes communis

Taxonomy ID: 2585118 (for references in articles please use NCBI:txid2585118)
current name
Alistipes communis Sakamoto et al. 2020 in [Sakamoto M et al. (2020)]
type strain of Alistipes communis: personal::5CBH24, JCM:32848, DSM:108979
includes:
Alistipes sp. 5CBH24
Alistipes sp. 6CPBBH3
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Alistipes obesi" Hugon et al. 2013, effective name 1)
type strain of "Alistipes obesi": personal::ph8, CSUR:P186, DSM:25724
includes:
Bacteroidales bacterium ph8
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
   Entrez records   
Database name Direct links Links from type
Nucleotide 6,981 4
Protein 25,857 -
Genome 1 -
Popset 1 -
PubMed Central 59 -
Gene 2,742 -
SRA Experiments 8 -
Identical Protein Groups 26,710 -
BioProject 36 -
BioSample 303 2
Assembly 77 -
Taxonomy 1 -

Notes:

Comments and References:

Sakamoto M et al. (2020), PubMed: abstract
Sakamoto, M., Ikeyama, N., Ogata, Y., Suda, W., Iino, T., Hattori, M., and Ohkuma, M. "Alistipes communis sp. nov., Alistipes dispar sp. nov. and Alistipes onderdonkii subsp. vulgaris subsp. nov., isolated from human faeces, and creation of Alistipes onderdonkii subsp. onderdonkii subsp. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):473-480.
Hugon P et al. (2013)
Hugon, P., Ramasamy, D., Lagier, J.-C., Rivet, R., Couderc, C., Raoult, D., and Fournier, P.-E. "Non contiguous-finished genome sequence and description of Alistipes obesi sp. nov." Stand. Genomic Sci. (2013) 7:427-439.
Lagier JC et al. (2012b)
Lagier, J.-C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., Trape, J.-F., Koonin, E.V., La Scola, B., and Raoult, D. "Microbial culturomics: paradigm shift in the human gut microbiome study." Clin. Microbiol. Infect. (2012) 18:1185-1193.

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4 records from this provider organism-specific BioCyc
6 records from provider organism-specific Integrated Microbial Genomes
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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