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Taxonomy browser (Ruegeria pomeroyi DSS-3)

Ruegeria pomeroyi DSS-3

Taxonomy ID: 246200 (for references in articles please use NCBI:txid246200)
current name
Ruegeria pomeroyi DSS-3
Ruegeria pomeroyi str. DSS-3
Ruegeria pomeroyi strain DSS-3
NCBI BLAST name: a-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Silicibacter pomeroyi DSS-3
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Ruegeria; Ruegeria pomeroyi
   Entrez records   
Database name Direct links Links from type
Nucleotide 437 11
Protein 9,513 -
Structure 37 -
Genome 1 -
GEO Datasets 54 -
Gene 4,375 -
SRA Experiments 70 -
Identical Protein Groups 5,334 -
Bio Project 46 -
Bio Sample 133 119
Bio Systems 223 -
Assembly 2 1
Probe 2 -
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Moran MA et al. (2004)
Moran, M.A., Buchan, A., Gonzalez, J.M., Heidelberg, J.F., Whitman, W.B., Kiene, R.P., Henriksen, J.R., King, G.M., Belas, R., Fuqua, C., Brinkac, L., Lewis, M, Johri, S., Weaver, B., Pai, G., Eisen, J.A., Rahe, E., Sheldon, W.M., Ye, W., Miller, T.R., Carlton, J., Rasko, D.A., Paulsen, I.T., Ren, Q., Daugherty, S.C., Deboy, R.T., Dodson, R.J., Durkin, A.S., Madupu, R., Nelson, W.C., Sullivan, S.A., Rosovitz, M.J., Haft, D.H., Selengut, J., and Ward, N. "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment." Nature (2004) 432:910-913.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ruegeria pomeroyi DSS-3 organism-specific BioCyc
GOLD: Go0000514 organism-specific Genomes On Line Database
637000267: Ruegeria pomeroyi DSS-3 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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