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Taxonomy browser (Geobacter sulfurreducens PCA)

Geobacter sulfurreducens PCA

Taxonomy ID: 243231 (for references in articles please use NCBI:txid243231)
Scientific name: Geobacter sulfurreducens PCA
equivalent: Geobacter sulfurreducens str. PCA
equivalent: Geobacter sulfurreducens strain PCA
Inherited blast name: d-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens
   Entrez records   
Database name Direct links
Nucleotide 368
Protein 11,103
Structure 33
Genome 1
GEO Datasets 94
PubMed Central 16
Gene 3,900
SRA Experiments 11
Identical Protein Groups 3,449
Bio Project 14
Bio Sample 18
Bio Systems 171
Assembly 2
Taxonomy 1

Comments and References:

Reference to PubMed documentMethe BA et al. (2003)
Methe, B.A., Nelson, K.E., Eisen, J.A., Paulsen, I.T., Nelson, W., Heidelberg, J.F., Wu, D., Wu, M., Ward, N., Beanan, M.J., Dodson, R.J., Madupu, R., Brinkac, L.M., Daugherty, S.C., DeBoy, R.T., Durkin, A.S., Gwinn, M., Kolonay, J.F., Sullivan, S.A., Haft, D.H., Selengut, J., Davidsen, T.M., Zafar, N., White, O., Tran, B., Romero, C., Forberger, H.A., Weidman, J., Khouri, H., Feldblyum, T.V., Utterback, T.R., Van Aken, S.E., Lovley, D.R., and Fraser, C.M. "Genome of Geobacter sulfurreducens: metal reduction in subsurface environments." Science (2003) 302:1967-1969.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
PRIMERWALK TRANSPOSON WGS ALL
TIGR - The Institute for Genome Research
2,719 41 56,164 58,924
Totals per type
2,719 41 56,164 58,924

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Geobacter sulfurreducensPCA organism-specific BioCyc
GOLD: Go0000602 organism-specific Genomes On Line Database
637000120: Geobacter sulfurreducens PCA organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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