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Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
   Entrez records   
Database name Direct links Subtree links Links from type
BioProject 15 15 -
BioSample 127 127 -
Conserved Domains 1 1 -
GEO DataSets 95 95 -
Gene 2,188 2,188 -
Identical Protein Groups 2,459 2,459 -
Nucleotide 221 221 -
PubChem BioAssay 5 5 -
PMC 36 36 -
Protein 4,388 4,388 -
SRA 135 135 -
Structure 66 66 -
Taxonomy 1 1 -

Porphyromonas gingivalis W83

Taxonomy ID: 242619 (for references in articles please use ncbitaxon:242619)
current name
Porphyromonas gingivalis W83
equivalent:
Porphyromonas gingivalis str. W83
Porphyromonas gingivalis strain W83
NCBI BLAST name: CFB group bacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage(full)
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; Porphyromonas gingivalis

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Chen T et al. (2004)
Chen, T., Hosogi, Y., Nishikawa, K., Abbey, K., Fleischmann, R.D., Walling, J., and Duncan, M.J. "Comparative whole-genome analysis of virulent and avirulent strains of Porphyromonas gingivalis." J. Bacteriol. (2004) 186:5473-5479.
Nelson KE et al. (2003)
Nelson, K.E., Fleischmann, R.D., DeBoy, R.T., Paulsen, I.T., Fouts, D.E., Eisen, J. A., Daugherty, S.C., Dodson, R.J., Durkin, A.S., Gwinn, M., Haft, D.H., Kolonay, J.F., Nelson, W.C., Mason, T., Tallon, L., Gray, J., Granger, D., Tettelin, H., Dong, H., Galvin, J.L., Duncan, M.J., Dewhirst, F.E., and Fraser, C.M. "Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83." J. Bacteriol. (2003) 185:5591-5601. (Corrigendum: J. Bacteriol. (2004) 186:593.)

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Porphyromonas gingivalis type strain (BD-ID 12506) meta-databases BacDive
Porphyromonas gingivalis W83 organism-specific BioCyc
Porphyromonas gingivalis W83 organism-specific BioCyc
Porphyromonas gingivalis W83 organism-specific BioCyc
GOLD: Go0000614 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
637000209: Porphyromonas gingivalis W83 organism-specific Integrated Microbial Genomes
2847366192: Porphyromonas gingivalis W83 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Porphyromonas gingivalis type strain (SI-ID 40424) meta-databases StrainInfo, Leibniz Institute DSMZ
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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