Taxonomy browser (Tsukamurella pseudospumae)

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Tsukamurella sunchonensis Seong et al. 2008 in [Validation List No. 123 (2008)]

type strain of Tsukamurella sunchonensis: JCM :15929, KCTC :9827, NRRL :B-24668, personal::SCNU5

homotypic synonym:

"Tsukamurella sunchonensis" Seong et al. 2003, effective name²⁾ in [Seong CN et al. (2003)]

homotypic synonym:

Tsukamurella sunchonensis Seong et al. 2008 emend. Nouioui et al. 2018, emended name³⁾ in [Nouioui I et al. (2018c)]

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Tsukamurellaceae; Tsukamurella

Entrez records
Database name	Direct links	Links from type
Nucleotide	427	147
Protein	16,811	-
PubMed Central	13	-
Identical Protein Groups	9,116	-
BioProject	3	-
BioSample	2	2
Datasets Genome	2	-
Taxonomy	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Nam SW et al. (2004), PubMed: abstract

Nam, S.-W., Kim, W., Chun, J., and Goodfellow, M. "Tsukamurella pseudospumae sp. nov., a novel actinomycete isolated from activated sludge foam." Int. J. Syst. Evol. Microbiol. (2004) 54(4):1209-1212.

Teng JL et al. (2016), doi: 10.3389/fmicb.2016.01137, PubMed: abstract

Teng, J.L.L., Tang, Y., Huang, Y., Guo, F.-B., Wei, W., Chen, J.H.K., Wong, S.S.Y., Lau, S.K.P., and Woo, P.C.Y. "Phylogenomic analyses and reclassification of species within the genus Tsukamurella: insights to species definition in the post-genomic era." Front. Microbiol. (2016) 7:1137.

Validation List No. 123 (2008), PubMed: abstract

Validation list No. 123: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2008) 58(9):1993-1994.

Seong CN et al. (2003)

Seong, C.H., Kim, Y.S., Baik, K.S., Choi, S.K., and Kim, M.B. "Tsukamurella sunchonensis sp. nov., a bacterium associated with foam in activated sludge." Korean J. Microbiol. (2003) 41(2):83-88.

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

List of Changes in Taxonomic Opinion No. 25 (2017)

"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67:7-8.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Tsukamurella pseudospumae	meta-databases	BacDive - Free access to bacterial information database
2 records from this provider	organism-specific	BioCyc
Tsukamurella pseudospumae Nam et al. 2004	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 2 Organisms	organism-specific	Genomes On Line Database
Tsukamurella pseudospumae	culture/stock collections	Global Catalogue of Microorganisms
2 records from this provider	organism-specific	Integrated Microbial Genomes
Tsukamurella pseudospumae \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry

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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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