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Taxonomy browser (Campylobacter jejuni RM1221)

Campylobacter jejuni RM1221

Taxonomy ID: 195099 (for references in articles please use NCBI:txid195099)
Scientific name: Campylobacter jejuni RM1221
equivalent: Campylobacter jejuni str. RM1221
equivalent: Campylobacter jejuni strain RM1221
NCBI BLAST® name: e-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter jejuni
   Entrez records   
Database name Direct links
Nucleotide 165
Protein 4,101
Structure 12
Genome 1
GEO Datasets 26
PubMed Central 7
Gene 1,941
SRA Experiments 4
Identical Protein Groups 2,030
Bio Project 3
Bio Sample 5
Bio Systems 156
Assembly 1
Probe 21
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentFouts DE et al. (2005)
Fouts, D.E., Mongodin, E.F., Mandrell, R.E., Miller, W.G., Rasko, D.A., Ravel, J., Brinkac, L.M., DeBoy, R.T., Parker, C.T., Daugherty, S.C., Dodson, R.J., Durkin, A.S., Madupu, R., Sullivan, S.A., Shetty, J.U., Ayodeji, M.A., Shvartsbeyn, A., Schatz, M.C., Badger, J.H., Fraser, C.M., and Nelson, K.E. " Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species." PLoS Biol. (2005) 3(1):e15. DOI: 10.1371/journal.pbio.0030015

Reference to PubMed documentParker CT et al. (2006)
Parker, C.T., Quinones, B., Miller, W.G., Horn, S.T., and Mandrell, R.E. "Comparative genomic analysis of Campylobacter jejuni strains reveals diversity due to genomic elements similar to those present in C. jejuni strain RM1221." J. Clin. Microbiol. (2006) 44:4125-4135.

Genome Information

See the TRACE Assembly
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
TIGR - The Institute for Genome Research
1,422 23,290 24,712
Totals per type
1,422 23,290 24,712

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Campylobacter jejuniRM1221 organism-specific BioCyc
GOLD: Go0000510 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
637000054: Campylobacter jejuni RM1221 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

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