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Taxonomy browser (Streptomyces albidoflavus)

Streptomyces albidoflavus

Taxonomy ID: 1886 (for references in articles please use NCBI:txid1886)
current name
Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
type strain of Streptomyces albidoflavus: ATCC:25422, CBS:416.34, CBS:920.69, BCRC:13699, CIP:105122, DSM:40455, ICMP:12537, IFO:13010, NBRC:13010, JCM:4446, KCTC:9202, BCCM/LMG:19300, NCIMB:10043, NRRL:B-1271, NRRL:B-2663, NRRL-ISP:5455, RIA:1202, VKM:Ac:746, ISP:5455
not considered type of Streptomyces albidoflavus: NCTC:12694, NBRC:13083, DSM:40233, NBRC:12790
basionym:
"Streptothrix albidoflava" Rossi Doria 1891, effective name 1)
homotypic synonym:
"Actinomyces albidoflavus" (Rossi Doria 1891) Gasperini 1894, effective name 2)
Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980) emend. Rong et al. 2009, emended name 3)
Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Nouioui et al. 2018, emended name 4) in [Nouioui I et al. (2018c)]
includes:
Streptomyces griseus 45H
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Cladothrix albido-flava" (sic) (Rossi Doria 1891) Mace 1901, effective name 5)
heterotypic synonym
Streptomyces globisporus subsp. caucasicus (Kudrina 1957) Pridham et al. 1958 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
type strain of Streptomyces globisporus subsp. caucasicus: ATCC:19907, CBS:120.60, DSM:40814, INA:13195/54, JCM:9867, NBRC:100770, NRRL:B-2593, NRRL-ISP:5157, RIA:319, VKM:Ac-1846, ISP:5157
basionym:
"Actinomyces globisporus var. caucasicus" Kudrina in Gauze et al. 1957, effective name 6)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
   Entrez records   
Database name Direct links Links from type
Nucleotide 33,409 758
Protein 649,142 -
Structure 6 -
GEO Datasets 79 -
PubMed Central 267 -
Gene 24,969 -
SRA Experiments 515 -
Protein Clusters 130 -
Identical Protein Groups 429,788 -
BioProject 60 -
BioSample 844 5
Datasets Genome 304 -
Taxonomy 1 -

Notes:

Comments and References:

Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Streptomyces albidoflavus group
According to Rong et al. (2009), the members of this group as well as Streptomyces globisporus subsp. caucasicus and Streptomyces griseus subsp. solvifaciens (syn. Streptomyces alba) are synonymous and should be classified as Streptomyces albioflavus.
Hain T et al. (1997)
Hain, T., Ward-Rainey, N., Kroppenstedt, R.M., Stackebrandt, E., and Rainey, F.A. "Discrimination of Streptomyces albidoflavus strains based on the size and number of 16S-23S ribosomal DNA intergenic spacers." Int. J. Syst. Bacteriol. (1997) 47:202-206.
Kiss Z et al. (2008)
Kiss, Z., Ward, A.C., Birko, Z., Chater, K.F., and Biro, S. "Streptomyces griseus 45H, a producer of the extracellular autoregulator protein factor C, is a member of the species Streptomyces albidoflavus." Int. J. Syst. Evol. Microbiol. (2008) 58:1029-1031.
Kudrina ES (1957)
Kudrina, E.S., In: G.F. Gauze,, T.P. Preobrazhenskaya,, E.S. Kudrina,, N.O. Blinov,, I.D. Ryabova, and M.A. Sveshnikova, (eds): Problems of classification of actinomycetes-antagonists. Government Publishing House of Medical Literature, Medgiz, Moscow, USSR, 1957, pp. 1-398. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 11 (2010), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.021212-0
Euzeby, J.P. "Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2010) 60:5-6.
Pridham RG et al. (1958), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1057356/
Pridham, R.G., Hesseltine, C.W., and Benedict, R.G. "A guide for the classification of streptomycetes according to selected groups: placement of strains in morphological sections." Appl. Microbiol. (1958) 6(1):52-79. [No abstract available.]
Rong X et al. (2009)
Rong, X., Guo, Y., and Huang, Y. "Proposal to reclassify the Streptomyces albidoflavus clade on the basis of multilocus sequence analysis and DNA-DNA hybridization, and taxonomic elucidation of Streptomyces griseus subsp. solvifaciens." Syst. Appl. Microbiol. (2009) 32(5):314-322.
Rossi-Doria T (1891)
Rossi-Doria, T. "Su di alcune specie di 'Streptothrix' trovate nell'aria studate in rapporto a quelle gia note a specialmente all 'Actinomyces'." Ann. Ist. Igiene Sper. Univ. Roma (1891) 1:399-438. [No PubMed record available.]
Shirling EB & Gottlieb D (1969)
Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies." Int. J. Syst. Bacteriol. (1969) 19:391-512. [No PubMed record available.]
Waksman SA & Henrici AT (1948b)
Waksman, S.A., and Henrici, A.T. "Family III. Streptomycetaceae Waksman and Henrici." IN: Breed, Murray, and Hitchens (Eds.), Bergey's Manual of Determinative Bacteriology, 6th Ed. (1948). The Williams and Wilkins Co., Balitmore. pp. 929-980. [No PubMed record available.]
Young JM et al. (1996)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [N.B.: reference with type strain information]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptomyces albidoflavus meta-databases BacDive - Free access to bacterial information database
8 records from this provider organism-specific BioCyc
Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD: 16 Organisms organism-specific Genomes On Line Database
Streptomyces albidoflavus culture/stock collections Global Catalogue of Microorganisms
13 records from this provider organism-specific Integrated Microbial Genomes
Streptomyces albidoflavus | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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