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Taxonomy browser (Escherichia coli O104:H4 str. C227-11)

Escherichia coli O104:H4 str. C227-11

Taxonomy ID: 1048254 (for references in articles please use NCBI:txid1048254)
Scientific name: Escherichia coli O104:H4 str. C227-11
equivalent: Escherichia coli O104:H4 strain C227-11
NCBI BLAST® name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli O104:H4
   Entrez records   
Database name Direct links
Nucleotide 110
Protein 21,189
Structure 1
Genome 1
SRA Experiments 14
Identical Protein Groups 7,525
Bio Project 5
Bio Sample 5
Assembly 3
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentGrad YH et al. (2012)
Grad, Y.H., Lipsitch, M., Feldgarden, M., Arachchi, H.M., Cerqueira, G.C., Fitzgerald, M., Godfrey, P., Haas, B.J., Murphy, C.I., Russ, C., Sykes, S., Walker, B.J., Wortman, J.R., Young, S., Zeng, Q., Abouelleil, A., Bochicchio, J., Chauvin, S., Desmet, T., Gujja, S., McCowan, C., Montmayeur, A., Steelman, S., Frimodt-Moller, J., Petersen, A.M., Struve, C., Krogfelt, K.A., Bingen, E., Weill, F.-X., Lander, E.S., Nusbaum, C., Birren, B.W., Hung, D.T., and Hanage, W.P. "Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011." Proc. Natl. Acad. Sci. USA (2012) 109:3065-3070.


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Escherichia coli meta-databases BacDive
Escherichia coliO104:H4 str. C227-11 organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
3 records from provider organism-specific Integrated Microbial Genomes
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Information from sequence entries

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