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Taxonomy browser (Mus musculus castaneus)

Mus musculus castaneus

Taxonomy ID: 10091 (for references in articles please use NCBI:txid10091)
Scientific name: Mus musculus castaneus Waterhouse, 1843
homotypic synonym: Mus castaneus
Genbank common name: southeastern Asian house mouse
NCBI BLAST® name: rodents
Rank: subspecies
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
   Entrez records   
Database name Direct links
Nucleotide 3,996
Protein 720
Genome 1
Popset 230
GEO Datasets 15
PubMed Central 424
Gene 13
SRA Experiments 920
Protein Clusters 13
Identical Protein Groups 247
Bio Project 23
Bio Sample 842
Assembly 1
Probe 130
Taxonomy 1

Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
PRIMERWALK SHOTGUN ALL
WUGSC - Washington University, Genome Sequencing Center
83 10,098 10,181
Totals per type
83 10,098 10,181

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mus musculus castaneus taxonomy taxonomy/phylogenetic Arctos Specimen Database
dryaddb supplemental materials Dryad Digital Repository
GOLD Multi-Isolate Organism: Go0390109 organism-specific Genomes On Line Database
Mus musculus castaneus Waterhouse 1843 taxonomy/phylogenetic Mammal Species of the World
house mouse strains (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
plazi taxonomy/phylogenetic Plazi
Mus musculus castaneus taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
2 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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