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3P4O
Crystal Structure of H2-Kb in complex with the mutant NP205-LCMV-V3A epitope YTAKYPNL, an 8-mer modified peptide from the LCMV
Biological unit 1: trimeric
Source organism: synthetic construct, ▼
Taxonomy
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Taxonomy Molecule
synthetic construct F
Mus musculus A, B
Number of proteins:
3 (Beta-2-microglobulin, H-2 class I histocompatib... )
Protein molecule
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AA -Click to explore this molecule neighbors
H-2 class I histocompatibility antigen, K-B alpha chain
BB -Click to explore this molecule neighbors
Beta-2-microglobulin
FF -Click to explore this molecule neighbors
NP205-LCMV epitope, YTAKYPNL
Similar Structures (7260)help
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Showing 1 to 10 out of 7260 selected structures help
      PDB ID Description Taxonomy Aligned Protein RMSD Aligned Residues Sequence Identity
1
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Partial
3P4M
Crystal Structure of H2-Kb in complex with the NP205-LCMV epitope YTVKYPNL, an 8-mer peptide from the LCMV
Others
2 0.34Å 377 100%
2
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Partial
3P4N
Crystal Structure of H2-Kb in complex with the NP205-PV epitope YTVKFPNM, an 8-mer peptide from PV
Others
2 0.40Å 377 100%
3
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Partial
3P9M
Crystal Structure of H2-Kb in complex with a mutant of the chicken ovalbumin epitope OVA-G4
Others
2 0.50Å 376 100%
4
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Partial
4PV8
Crystal Structure of H2Kb-Q600F complex
Others
2 0.53Å 376 100%
5
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Partial
1RJZ
Mhc Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and Herpies Simplex Virus Mutant Glycoprotein B Peptide
Others
2 0.55Å 376 98%
6
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Partial
1RJY
Mhc Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and Herpes Simplex Virus Glycoprotein B Peptide
Others
2 0.55Å 376 98%
7
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Partial
4PV9
Crystal Structure of H2Kb-Q600V complex
Others
2 0.56Å 376 100%
8
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Partial
4PGC
MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGN(3,5-diiodotyrosine)PAL
Others
2 0.64Å 376 100%
9
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Partial
1T0N
Conformational switch in polymorphic H-2K molecules containing an HSV peptide
Others
2 0.66Å 376 98%
10
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Partial
1KJ3
Mhc Class I H-2Kb molecule complexed with pKB1 peptide
Others
2 0.68Å 376 100%
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{"1":"H-2 class I histocompatibility antigen, K-B alpha chain","2":"Beta-2-microglobulin","6":"NP205-LCMV epitope, YTAKYPNL"}
Citing VAST
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.