1KPV: VAST+ Similar Structure Assemblies and Proteins

National Center for
Biotechnology Information

High resolution crystal structure of the MHC class I complex H-2Kb/SEV9

Biological unit 1: trimeric

Source organism:

synthetic construct, ▼

Taxonomy

Taxonomy	Molecule
synthetic construct	P
Mus musculus	A, B

Number of proteins:

3 (H-2 class I histocompatibility antigen, K-B alp... ▼)

Protein molecule

	H-2 class I histocompatibility antigen, K-B alpha chain
	beta-2-microglobulin
	Nucleocapsid protein

Number of chemicals:

8 (alpha-L-fucopyranose,(4S)-2-METHYL-2,4-PENTANED... ▼)

Chemical

	alpha-L-fucopyranose
	(4S)-2-METHYL-2,4-PENTANEDIOL (3)
	2-acetamido-2-deoxy-beta-D-glucopyranose (2)
	PHOSPHATE ION (2)

Similar Structures (5586)

			PDB ID	Description	Taxonomy▲▼	Aligned Protein▲▼	RMSD▲▼	Aligned Residues▲▼	Sequence Identity▲▼
1	Expand row	Partial	4PG9	MHC Class I in complex with Sendai virus nucleoprotein peptide FAPGNYPAL	Others	2	0.24Å	372	100%
2	Expand row	Partial	4PGE	MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGNYPAW	Others	2	0.25Å	372	100%
3	Expand row	Partial	4PGD	MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGNYPAF	Others	2	0.39Å	372	100%
4	Expand row	Partial	3ROO	Murine class I major histocompatibility complex H-2Kb in complex with immunodominant LCMV-derived gp34-41 peptide	Others	2	0.48Å	372	100%
5	Expand row	Partial	4HS3	Crystal structure of H-2Kb with a disulfide stabilized F pocket in complex with the LCMV derived peptide GP34	Others	2	0.55Å	372	99%
6	Expand row	Partial	5JHD	Crystal structure of LS10-TCR/M1-HLA-A*02 complex	Others	2	1.22Å	372	71%
7	Expand row	Partial	5DEG	Crystal structure of B*27:06 bound to the pVIPR peptide	Homo sapiens	2	1.26Å	372	71%
8	Expand row	Partial	4F7T	Crystal Structure of HLA-A*2402 Complexed with a Newly Identified Peptide from 2009 H1N1 PB1 (498-505)	Others	2	1.36Å	372	70%
9	Expand row	Partial	5T6W	HLA-B*57:01 presenting SSTRGISQLW	Others	2	1.38Å	372	70%
10	Expand row	Partial	2X4T	Crystal structure of MHC CLass I HLA-A2.1 bound to a Peiodate- cleavable peptide	Others	2	1.39Å	372	71%

{"1":"H-2 class I histocompatibility antigen, K-B alpha chain","2":"beta-2-microglobulin","3":"Nucleocapsid protein"}

	Partial	Partial match, 2 proteins (874)	–
	Partial	Partial match, 1 protein (4712)	–