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1TNO: 
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a KKKSKTKCVIM Peptide Derived from K-Ras4B
Biological unit 1: trimeric
Source organism: synthetic construct, ▼
Taxonomy
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Taxonomy Molecule
synthetic construct M
Rattus norvegicus A, B
Number of proteins:
3 (Geranylgeranyl transferase type I beta subunit,... ▼)
Protein molecule
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AA -Click to explore this molecule neighbors
 geranylgeranyltransferase type I alpha subunit
BB -Click to explore this molecule neighbors
 Geranylgeranyl transferase type I beta subunit
MM -Click to explore this molecule neighbors
 c-K-ras2 protein isoform b
Number of chemicals:
3 (2-(N-MORPHOLINO)-ETHANESULFONIC ACID,2-[METHYL-... ▼)
Chemical
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2-(N-MORPHOLINO)-ETHANESULFONIC ACID
2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE
ZINC ION
Similar Structures (969)help
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Showing 1 to 10 out of 969 selected structures help
      PDB ID Description Taxonomy▲▼ Aligned Protein▲▼ RMSD▲▼ Aligned Residues▲▼ Sequence Identity▲▼
1
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Partial
 1N4R
Protein Geranylgeranyltransferase type-I Complexed with a Geranylgeranylated KKKSKTKCVIL Peptide Product
Homo sapiens/Rattus norvegicus
 2 0.20Å 650 100%
2
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Partial
 1N4S
Protein Geranylgeranyltransferase type-I Complexed with GGPP and a Geranylgeranylated KKKSKTKCVIL Peptide Product
Homo sapiens/Rattus norvegicus
 2 0.20Å 650 100%
3
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Partial
 1N4P
Protein Geranylgeranyltransferase type-I Complexed with Geranylgeranyl Diphosphate
Rattus norvegicus
 2 0.21Å 650 100%
4
Expand row
Partial
 1S64
Rat protein geranylgeranyltransferase type-I complexed with L-778,123 and a sulfate anion
Rattus norvegicus
 2 0.22Å 650 100%
5
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Partial
 1TNU
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a GCINCCKVL Peptide Derived from RhoB
Others
 2 0.22Å 650 100%
6
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Partial
 1TNZ
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a RRCVLL Peptide Derived from Cdc42 splice isoform-2
Others
 2 0.23Å 650 100%
7
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Partial
 1TNB
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a substrate KKSKTKCVIF Peptide Derived from TC21
Others
 2 0.24Å 650 100%
8
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Partial
 1N4Q
Protein Geranylgeranyltransferase Type-i Complexed With A Ggpp Analog And A Kkksktkcvil Peptide
Homo sapiens/Rattus norvegicus
 2 0.24Å 650 100%
9
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Partial
 1TNY
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a FREKKFFCAIL Peptide Derived from the Heterotrimeric G Protein Gamma-2 Subunit
Others
 2 0.35Å 650 100%
10
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Partial
 8RDX
PGGtase I in complex with probe BAY-6092
Rattus norvegicus
 2 0.42Å 650 100%
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{"1":"geranylgeranyltransferase type I alpha subunit","2":"Geranylgeranyl transferase type I beta subunit","13":"c-K-ras2 protein isoform b"}
Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.