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1KNA
Chromo domain of HP1 complexed with histone H3 tail containing dimethyllysine 9
Biological unit 1: dimeric
Source organism: synthetic construct, ▼
Taxonomy
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Number of proteins:
2 (HETEROCHROMATIN PROTEIN 1, METHYLATED Histone H3 )
Protein molecule
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HETEROCHROMATIN PROTEIN 1
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METHYLATED Histone H3
Similar Structures (67)help
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Showing 1 to 10 out of 67 selected structures help
      PDB ID Description Taxonomy Aligned Protein RMSD Aligned Residues Sequence Identity
1
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Partial
1Q3L
Chromodomain Of HP1 Complexed With Histone H3 Tail Containing monomethyllysine 9
Others
1 0.18Å 52 100%
2
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Partial
6ASZ
Chromodomain HP1 with Y24F mutation bound to histone H3 peptide containing trimethyl lysine
Drosophila melanogaster
1 0.20Å 52 98%
3
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Partial
6AT0
Chromodomain HP1 with a p-nitro-L-phenylalanine mutation at position 24 bound to histone H3 peptide containing trimethyl lysine
Drosophila melanogaster
1 0.22Å 52 98%
4
Expand row
Partial
6D08
Crystal structure of an engineered bump-hole complex of mutant human chromobox homolog 1 (CBX1) with H3K9bn peptide
Homo sapiens
1 0.71Å 52 61%
5
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Partial
6D07
Crystal structure of the complex between human chromobox homolog 1 (CBX1) and H3K9me3 peptide
Homo sapiens
1 0.73Å 52 63%
6
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Partial
4QUC
Crystal structure of chromodomain of Rhino
Drosophila melanogaster
1 0.94Å 52 40%
7
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Partial
1KNE
Chromo domain of HP1 complexed with histone H3 tail containing trimethyllysine 9
Others
1 0.23Å 51 100%
8
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Partial
3TZD
Crystal Structure Of The Complex Of Human Chromobox Homolog 3 (cbx3)
Homo sapiens
1 0.71Å 51 58%
9
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Partial
4MN3
Chromodomain Antagonists That Target The Polycomb-group Methyllysine Reader Protein Chromobox Homolog 7 (cbx7)
Others
1 0.75Å 51 49%
10
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Partial
3R93
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
Others
1 0.78Å 51 37%
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{"1":"HETEROCHROMATIN PROTEIN 1","2":"METHYLATED Histone H3"}
Citing VAST
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.