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4P5H: 
Structure of Clostridium perfringens Enterotoxin with a peptide derived from a modified version of ECL-2 of Claudin 2
Biological unit 1: hexameric
Source organism: Mus musculus, ▼
Taxonomy
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Taxonomy Molecule
Mus musculus 1, Y, Z
Clostridium perfringens J, K, L
Number of proteins:
6 (Claudin-2, Heat-labile enterotoxin B chain ▼)
Protein molecule
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11 -Click to explore this molecule neighborsYY -Click to explore this molecule neighborsZZ -Click to explore this molecule neighbors
 Claudin-2
JJ -Click to explore this molecule neighborsKK -Click to explore this molecule neighborsLL -Click to explore this molecule neighbors
 Heat-labile enterotoxin B chain
Similar Structures (22)help
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Showing 1 to 10 out of 22 selected structures help
      PDB ID Description Taxonomy▲▼ Aligned Protein▲▼ RMSD▲▼ Aligned Residues▲▼ Sequence Identity▲▼
1
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Partial
 3ZIW
Clostridium Perfringens Enterotoxin, D48a Mutation And N- Terminal 37 Residues Deleted
Clostridium perfringens
 3 1.20Å 858 99%
2
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Partial
 2YHJ
Clostridium perfringens Enterotoxin at 4.0 Angstrom Resolution
Clostridium perfringens NCTC 8239
 3 1.01Å 855 98%
3
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Partial
 3AM2
Clostridium perfringens enterotoxin
Clostridium perfringens
 3 1.81Å 852 99%
4
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Partial
 3ZIX
Clostridium perfringens Enterotoxin with the N-terminal 37 residues deleted
Clostridium perfringens
 1 0.92Å 286 100%
5
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Partial
 2XH6
Clostridium perfringens enterotoxin
Clostridium perfringens
 1 1.05Å 285 98%
6
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Partial
 4LO6
HA70-alpha2,6-SiaLC
Clostridium botulinum
 1 2.37Å 147 23%
7
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Partial
 4EN9
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactosamine
Clostridium botulinum
 1 2.33Å 146 26%
8
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Partial
 4LO4
Apo HA-70
Clostridium botulinum
 1 2.34Å 146 23%
9
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Partial
 2ZS6
HA3 subcomponent of botulinum type C progenitor toxin
Clostridium botulinum
 1 2.52Å 146 26%
10
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Partial
 3WIN
Clostridium botulinum Hemagglutinin
Clostridium botulinum B
 1 2.24Å 145 23%
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{"1":"Claudin-2","14":"Heat-labile enterotoxin B chain","15":"Heat-labile enterotoxin B chain","16":"Heat-labile enterotoxin B chain","29":"Claudin-2","30":"Claudin-2"}
Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.