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sigma-54-dependent Fis family transcriptional regulator

sigma-54-dependent Fis family transcriptional regulator containing a REC domain, similar to Escherichia coli transcriptional regulators AtoC and NR(I), which function in the regulation of genes involved in acetoacetate metabolism and nitrogen assimilation, respectively

Arch. IDVersionDate PublishedReview Level
1282060412018-12-13
curated
Arch. ID12820604
Version1
Date Published2018-12-13
Review Level
curated
AtoC: DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]AtoCrad23: UV excision repair protein Rad23rad23
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Sequences with this architecture
Name, label and taxonomic scope
Taxonomic scopeNameLabel
All organismssigma-54-dependent Fis family transcriptional regulatorsigma-54-dependent Fis family transcriptional regulator containing a REC domain, similar to Escherichia coli transcriptional regulators AtoC and NR(I), which function in the regulation of genes involved in acetoacetate metabolism and nitrogen assimilation, respectively
Name, label and taxonomic scope
Tax. ExpAll organisms
Namesigma-54-dependent Fis family transcriptional regulator
Labelsigma-54-dependent Fis family transcriptional regulator containing a REC domain, similar to Escherichia coli transcriptional regulators AtoC and NR(I), which function in the regulation of genes involved in acetoacetate metabolism and nitrogen assimilation, respectively
Supporting evidence
Publications
  • PMID 23818155: Structure, function, and tethering of DNA-binding domains in s54 transcriptional activators.
  • PMID 17537579: Molecular modeling and functional analysis of the AtoS-AtoC two-component signal transduction system of Escherichia coli.
  • PMID 17616594: Interactions of the antizyme AtoC with regulatory elements of the Escherichia coli atoDAEB operon.
  • PMID 8065259: Sequence and function of LuxO, a negative regulator of luminescence in Vibrio harveyi.
Protein Accession
  • P0C5S5: RecName: Full=Luminescence regulatory protein LuxO
  • P14375: RecName: Full=Transcriptional regulatory protein ZraR
  • Q06065: RecName: Full=Acetoacetate metabolism regulatory protein AtoC; AltName: Full=Ornithine decarboxylase antizyme; AltName: Full=Ornithine/arginine decarboxylase inhibitor
  • P0AFB8: RecName: Full=Nitrogen regulation protein NR(I)
  • KPW65573: Sigma-54 dependent DNA-binding response regulator FleR [Pseudomonas syringae pv. broussonetiae]
CDD
  • COG2204: AtoC : DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
  • cd00156: REC : Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR,...
  • pfam00158: Sigma54_activat : Sigma-54 interaction domain
  • pfam02954: HTH_8 : Bacterial regulatory protein, Fis family
Gene IDs
Conserved domains in this architecture
AccessionShort nameTitle
COG2204AtoCDNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
cl36702rad23UV excision repair protein Rad23

    HHS Vulnerability Disclosure