9J2F: Structure of photosynthetic LH1-RC complex from the purple bacterium Blastochloris tepida

PDB ID: 9J2FDownload
MMDB ID: 257125
PDB Deposition Date: 2024/8/6
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 9J2F: 54-meric; determined by author and by software
Molecular Components in 9J2F
Label Count Molecule
Proteins (54 molecules)
1
Photosynthetic Reaction Center Cytochrome C Subunit
Molecule annotation
1
Reaction Center Protein L Chain
Molecule annotation
1
Reaction Center Protein M Chain
Molecule annotation
1
Photosynthetic Reaction Center Subunit H
Molecule annotation
17
Antenna Complex Alpha/beta Subunit Domain-containing Protein
Molecule annotation
17
Antenna Complex Alpha/beta Subunit Domain-containing Protein
Molecule annotation
1
Light-harvesting Protein Gamma1
Molecule annotation
15
Light-harvesting Protein B-1015 Gamma Chain
Molecule annotation
Chemicals and Non-standard biopolymers (89 molecules)
1
4
HEME CHEME C
2
1
MAGNESIUM IONMAGNESIUM ION
3
5
Ubiquinone-8Ubiquinone-8
4
1
DIACYL GLYCEROLDIACYL GLYCEROL
5
38
BACTERIOCHLOROPHYLL BBACTERIOCHLOROPHYLL B
6
2
BACTERIOPHEOPHYTIN BBACTERIOPHEOPHYTIN B
7
5
CARDIOLIPINCARDIOLIPIN
8
1
FE (III) IONFE (III) ION
9
1
MENAQUINONE-7MENAQUINONE-7
10
1
15-cis-1,2-dihydroneurosporene15-cis-1,2-dihydroneurosporene
11
8
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
12
6
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
13
16
all-trans-1,2-dihydroneurosporeneall-trans-1,2-dihydroneurosporene
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303