9F6D: Human DNA polymerase epsilon bound to DNA and PCNA (open conformation)

PDB ID: 9F6DDownload
MMDB ID: 250918
PDB Deposition Date: 2024/5/1
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.6  Å
Source Organism:
Similar Structures:
Biological Unit for 9F6D: hexameric; determined by author and by software (PISA)
Molecular Components in 9F6D
Label Count Molecule
Proteins (4 molecules)
1
DNA Polymerase Epsilon Catalytic Subunit a
(Gene symbol: POLE)
Molecule annotation
3
Proliferating Cell Nuclear Antigen
(Gene symbol: PCNA)
Molecule annotation
Nucleotides(2 molecules)
1
DNA Nascent Strand
Molecule annotation
1
DNA Template Strand
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
2',3'-dideoxyadenosine triphosphate2',3'-dideoxyadenosine triphosphate
3
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303