9D77: Crystal form of Netrin-1 mimics nanotubes

PDB ID: 9D77Download
MMDB ID: 253379
PDB Deposition Date: 2024/8/16
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 3.4  Å
Source Organism:
Similar Structures:
Biological Unit for 9D77: dimeric; determined by author and by software (PISA)
Molecular Components in 9D77
Label Count Molecule
Proteins (2 molecules)
2
Netrin-1
(Gene symbol: NTN1)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
8
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
alpha-L-fucopyranosealpha-L-fucopyranose
3
2
CALCIUM IONCALCIUM ION
4
2
CHLORIDE IONCHLORIDE ION
5
4
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303