9D1W: Cryo-EM structure of PGDM1400 Fab bound to HIV-1 BG505 DS-SOSIP.664 Env trimer

PDB ID: 9D1WDownload
MMDB ID: 257309
PDB Deposition Date: 2024/8/8
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.44  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 9D1W: octameric; determined by author and by software
Molecular Components in 9D1W
Label Count Molecule
Proteins (8 molecules)
3
Hiv-1 Bg505 Ds-sosip Gp120
Molecule annotation
1
Pgdm1400 Heavy Chain
Molecule annotation
1
Pgdm1400 Light Chain
Molecule annotation
3
Hiv-1 Bg505 Ds-sosip Glycoprotein Gp41
Molecule annotation
Chemicals and Non-standard biopolymers (118 molecules)
1
83
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
7
beta-D-mannopyranosebeta-D-mannopyranose
3
28
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303