9CDB: CryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in cA6 (partial density) bound form with ATP (partial density)

PDB ID: 9CDBDownload
MMDB ID: 254294
PDB Deposition Date: 2024/6/24
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.6  Å
Source Organism:
Similar Structures:
Biological Unit for 9CDB: nonameric; determined by author and by software
Molecular Components in 9CDB
Label Count Molecule
Proteins (6 molecules)
6
Adenosine Deaminase Domain-containing Protein
Molecule annotation
Nucleotides(3 molecules)
3
RNA (5'-r(p*ap*ap*ap*ap*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
12
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
6
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303