9C88: Cryo-EM Structure of a Proteolytic ClpXP AAA+ Machine Translocating a Portion of a Branched-Degron DHFR Substrate

PDB ID: 9C88Download
MMDB ID: 253699
PDB Deposition Date: 2024/6/12
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 2.6  Å
Source Organism:
Similar Structures:
Biological Unit for 9C88: 21-meric; determined by author and by software
Molecular Components in 9C88
Label Count Molecule
Proteins (21 molecules)
1
Branched-degron Dhfr
Molecule annotation
6
Atp-dependent CLP Protease Atp-binding Subunit Clpx
Molecule annotation
14
Atp-dependent CLP Protease Proteolytic Subunit
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
3
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
2
4
MAGNESIUM IONMAGNESIUM ION
3
3
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303