9BS0: YphC-treated 45SYphC particle. Class 5

PDB ID: 9BS0Download
MMDB ID: 257288
PDB Deposition Date: 2024/5/12
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Similar Structures:
Biological Unit for 9BS0: 25-meric; determined by author and by software
Molecular Components in 9BS0
Label Count Molecule
Proteins (23 molecules)
1
Large Ribosomal Subunit Protein UL2
(Gene symbol: rplB)
Molecule annotation
1
Large Ribosomal Subunit Protein UL3
(Gene symbol: rplC)
Molecule annotation
1
Large Ribosomal Subunit Protein UL4
(Gene symbol: rplD)
Molecule annotation
1
Large Ribosomal Subunit Protein UL6
(Gene symbol: rplF)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul13
(Gene symbol: rplM)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul14
(Gene symbol: rplNA)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul15
(Gene symbol: rplO)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl17
(Gene symbol: rplQ)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl19
(Gene symbol: rplS)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl20
(Gene symbol: rplT)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl21
(Gene symbol: rplU)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul22
(Gene symbol: rplV)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul23
(Gene symbol: rplW)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul24
(Gene symbol: rplX)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl27
(Gene symbol: rpmA)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul29
(Gene symbol: rpmC)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul30
(Gene symbol: rpmD)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl32
(Gene symbol: rpmF)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl34
(Gene symbol: rpmH)
Molecule annotation
1
Large Ribosomal Subunit Protein Ul18
(Gene symbol: rplR)
Molecule annotation
1
Gtpase DER
(Gene symbol: der)
Molecule annotation
1
Large Ribosomal Subunit Protein Bl33a
(Gene symbol: rpmGA)
Molecule annotation
1
Large Ribosomal Subunit Protein UL1
(Gene symbol: rplA)
Molecule annotation
Nucleotides(2 molecules)
1
23S rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303