9B5E: Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 10 map and model from consensus

PDB ID: 9B5EDownload
MMDB ID: 248025
PDB Deposition Date: 2024/3/22
Updated in MMDB: 2024/09
Experimental Method:
electron microscopy
Resolution: 2.81  Å
Source Organism:
Similar Structures:
Biological Unit for 9B5E: tetrameric; determined by author
Molecular Components in 9B5E
Label Count Molecule
Proteins (4 molecules)
1
Ubiquitin-activating Enzyme E1 1
Molecule annotation
1
Large Ribosomal Subunit Protein El40b
Molecule annotation
1
Ubiquitin-conjugating Enzyme E2 4
Molecule annotation
1
Ubiquitin
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303