9B2C: Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the PD33 antibody Fab fragment and the Kappa light chain nanobody

PDB ID: 9B2CDownload
MMDB ID: 254959
PDB Deposition Date: 2024/3/14
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Porcine deltacoronavirus▼
Similar Structures:
Biological Unit for 9B2C: tetrameric; determined by author and by software
Molecular Components in 9B2C
Label Count Molecule
Proteins (4 molecules)
1
Spike Glycoprotein
Molecule annotation
1
Pd33 FAB Kappa Light Chain
Molecule annotation
1
Kappa Light Chain Nanobody
Molecule annotation
1
Pd33 FAB Heavy Chain
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303