9B1E: Cryo-EM structure of native SWR1 bound to nucleosome (composite structure)

PDB ID: 9B1EDownload
MMDB ID: 253345
PDB Deposition Date: 2024/3/13
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 4.4  Å
Source Organism:
Saccharomyces cerevisiae W303▼
Similar Structures:
Biological Unit for 9B1E: 21-meric; determined by author and by software
Molecular Components in 9B1E
Label Count Molecule
Proteins (19 molecules)
1
Helicase Swr1
Molecule annotation
1
Vacuolar Protein Sorting-associated Protein 72
Molecule annotation
1
Actin-like Protein Arp6
Molecule annotation
1
Vacuolar Protein Sorting-associated Protein 71
Molecule annotation
3
Ruvb-like Protein 1
Molecule annotation
3
Ruvb-like Protein 2
Molecule annotation
1
Swr1-complex Protein 3
Molecule annotation
2
Histone H2A
Molecule annotation
2
Histone H2B
Molecule annotation
2
Histone H3
Molecule annotation
2
Histone H4
Molecule annotation
Nucleotides(2 molecules)
1
DNA (214-mer)
Molecule annotation
1
DNA (214-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
8
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
2
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
3
8
MAGNESIUM IONMAGNESIUM ION
4
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303