9B1D: Cryo-EM structure of native SWR1 bound to DNA (composite structure)

PDB ID: 9B1DDownload
MMDB ID: 253344
PDB Deposition Date: 2024/3/13
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Saccharomyces cerevisiae W303▼
Similar Structures:
Biological Unit for 9B1D: dodecameric; determined by author and by software
Molecular Components in 9B1D
Label Count Molecule
Proteins (10 molecules)
1
Helicase Swr1
Molecule annotation
1
Vacuolar Protein Sorting-associated Protein 72
Molecule annotation
1
Actin-like Protein Arp6
Molecule annotation
1
Vacuolar Protein Sorting-associated Protein 71
Molecule annotation
3
Ruvb-like Protein 1
Molecule annotation
3
Ruvb-like Protein 2
Molecule annotation
Nucleotides(2 molecules)
1
DNA (147-mer)
Molecule annotation
1
DNA (147-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
4
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTERPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2
8
MAGNESIUM IONMAGNESIUM ION
3
2
ZINC IONZINC ION
4
4
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303