8ZBZ: SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with 3 D1F6 Fabs (1 RBD up)

PDB ID: 8ZBZDownload
MMDB ID: 247107
PDB Deposition Date: 2024/4/28
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 4.71  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8ZBZ: nonameric; determined by author
Molecular Components in 8ZBZ
Label Count Molecule
Proteins (9 molecules)
3
Spike Glycoprotein
Molecule annotation
3
Light Chain of D1f6 FAB
Molecule annotation
3
Heavy Chain of D1f6 FAB
Molecule annotation
Chemicals and Non-standard biopolymers (60 molecules)
1
58
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303