8ZBY: SARS-CoV-2 Omicron BA.1 spike trimer (x2-4P) in complex with 3 D1F6 Fabs (0 RBD up)

PDB ID: 8ZBYDownload
MMDB ID: 247106
PDB Deposition Date: 2024/4/28
Updated in MMDB: 2025/08
Experimental Method:
electron microscopy
Resolution: 3.67  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8ZBY: nonameric; determined by author
Molecular Components in 8ZBY
Label Count Molecule
Proteins (9 molecules)
3
Spike Glycoprotein
Molecule annotation
3
Heavy Chain of D1f6 FAB
Molecule annotation
3
Light Chain of D1f6 FAB
Molecule annotation
Chemicals and Non-standard biopolymers (48 molecules)
1
48
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303