8Z62: Crystal structure of rRNA (uracil-C5)-methyltransferase from Pyrococcus horikoshii OT3

PDB ID: 8Z62Download
MMDB ID: 253661
PDB Deposition Date: 2024/4/18
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8Z62: monomeric; determined by author
Molecular Components in 8Z62
Label Count Molecule
Protein (1 molecule)
1
23S rRNA (Uracil(747)-c(5))-methyltransferase
(Gene symbol: rlmD)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
SODIUM IONSODIUM ION
2
2
SULFATE IONSULFATE ION
3
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
4
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303