8YVB: Crystal structure of Caenorhabditis elegans ZIM-1 ZF1-2-CTD domain in complex with Chromosome II/III pairing center

PDB ID: 8YVBDownload
MMDB ID: 256468
PDB Deposition Date: 2024/3/28
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 8YVB: trimeric; determined by author and by software (PISA)
Molecular Components in 8YVB
Label Count Molecule
Protein (1 molecule)
1
C2h2-type Domain-containing Protein
(Gene symbol: zim-1)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*tp*gp*gp*tp*cp*tp*gp*cp*tp*a)-3')
Molecule annotation
1
DNA (5'-d(p*ap*gp*cp*ap*gp*ap*cp*cp*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303