8YV8: Cryo-EM structure of CDCA7 bound to nucleosome including hemimethylated CpG site in Widom601 positioning sequence

PDB ID: 8YV8Download
MMDB ID: 250480
PDB Deposition Date: 2024/3/28
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8YV8: undecameric; determined by author
Molecular Components in 8YV8
Label Count Molecule
Proteins (9 molecules)
2
Histone H3.1
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2A Type 1-b/e
Molecule annotation
2
Histone H2B Type 1-K
Molecule annotation
1
Cell Division Cycle-associated Protein 7
Molecule annotation
Nucleotides(2 molecules)
1
DNA (132-mer)
Molecule annotation
1
DNA (132-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
3
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303