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8YS4: Overall structure of Eastern Equine Encephalitis virus VLP in complex with the receptor VLDLR LA3-5

PDB ID:

MMDB ID:

251580

PDB Deposition Date:

2024/3/22

Updated in MMDB:

2024/09

Experimental Method:

electron microscopy

Resolution:

4.8 Å

Source Organism:

Eastern equine encephalitis virus▼

Taxonomy	Molecule
Eastern equine encephalitis virus	A, B, C, D, E, F, G, H, I, J, K, L
Homo sapiens	M, N, O, P, Q, R, S, T

Similar Structures:

Biological Unit for 8YS4: 1200-meric; determined by author and by software (UCSF CHIMERA 1.16_b42360.)

Molecular Components in 8YS4
Label	Count	Molecule
Proteins (1200 molecules)
A D G J A_1 A_2 A_3 A_4 A_5 A_6 A_7 A_8 A_9 A_10 A_11 A_12 A_13 A_14 A_15 A_16 A_17 A_18 A_19 A_20 A_21 A_22 A_23 A_24 A_25 A_26 …	240	Spike Glycoprotein E1
B E H K B_1 B_2 B_3 B_4 B_5 B_6 B_7 B_8 B_9 B_10 B_11 B_12 B_13 B_14 B_15 B_16 B_17 B_18 B_19 B_20 B_21 B_22 B_23 B_24 B_25 B_26 …	240	Spike Glycoprotein E2
C F I L C_1 C_2 C_3 C_4 C_5 C_6 C_7 C_8 C_9 C_10 C_11 C_12 C_13 C_14 C_15 C_16 C_17 C_18 C_19 C_20 C_21 C_22 C_23 C_24 C_25 C_26 …	240	Capsid Protein
M N O P M_1 M_2 M_3 M_4 M_5 M_6 M_7 M_8 M_9 M_10 M_11 M_12 M_13 M_14 M_15 M_16 M_17 M_18 M_19 M_20 M_21 M_22 M_23 M_24 M_25 M_26 …	240	Very Low-density Lipoprotein Receptor
Q R S T Q_1 Q_2 Q_3 Q_4 Q_5 Q_6 Q_7 Q_8 Q_9 Q_10 Q_11 Q_12 Q_13 Q_14 Q_15 Q_16 Q_17 Q_18 Q_19 Q_20 Q_21 Q_22 Q_23 Q_24 Q_25 Q_26 …	240	Very Low-density Lipoprotein Receptor
Chemicals and Non-standard biopolymers (480 molecules)
1	480	CALCIUM ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB