8YON: structure of phage T6 full-length topoisomerase II bound with DNA

PDB ID: 8YONDownload
MMDB ID: 252753
PDB Deposition Date: 2024/3/13
Updated in MMDB: 2025/12
Experimental Method:
electron microscopy
Resolution: 6.73  Å
Source Organism:
DNA molecule▼
Similar Structures:
Biological Unit for 8YON: hexameric; determined by author and by software
Molecular Components in 8YON
Label Count Molecule
Proteins (4 molecules)
2
DNA Topoisomerase Medium Subunit
Molecule annotation
2
DNA Topoisomerase (Atp-hydrolyzing)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (50-mer)
Molecule annotation
1
DNA (50-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303