8YO1: structure of phage T6 topoisomerase II ATPase domain bound with AMPPNP

PDB ID: 8YO1Download
MMDB ID: 252746
PDB Deposition Date: 2024/3/12
Updated in MMDB: 2025/12
Experimental Method:
electron microscopy
Resolution: 3.55  Å
Source Organism:
Similar Structures:
Biological Unit for 8YO1: dimeric; determined by author and by software
Molecular Components in 8YO1
Label Count Molecule
Proteins (2 molecules)
2
DNA Topoisomerase (Atp-hydrolyzing)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
2
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303