8Y1M: Xylanase R from Bacillus sp. TAR-1 complexed with xylobiose

PDB ID: 8Y1MDownload
MMDB ID: 247382
PDB Deposition Date: 2024/1/25
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 8Y1M: monomeric; determined by author and by software (PISA)
Molecular Components in 8Y1M
Label Count Molecule
Protein (1 molecule)
1
Endo-1,4-beta-xylanase a
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
4
beta-D-xylopyranosebeta-D-xylopyranose
2
5
CALCIUM IONCALCIUM ION
3
2
ACETATE IONACETATE ION
4
5
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
5
2
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
6
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303