8Y18: Cryo-EM structure of SARS-CoV-2 Omicron JN.1 RBD in complex with human ACE2 (local refinement from the spike protein)

PDB ID: 8Y18Download
MMDB ID: 249326
PDB Deposition Date: 2024/1/23
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 3.04  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8Y18: dimeric; determined by author
Molecular Components in 8Y18
Label Count Molecule
Proteins (2 molecules)
1
Angiotensin-converting Enzyme 2
Molecule annotation
1
Spike Glycoprotein
Molecule annotation
Chemicals and Non-standard biopolymers (16 molecules)
1
13
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303