8Y16: Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein in complex with human ACE2

PDB ID: 8Y16Download
MMDB ID: 249325
PDB Deposition Date: 2024/1/23
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 2.98  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8Y16: hexameric; determined by author
Molecular Components in 8Y16
Label Count Molecule
Proteins (6 molecules)
3
Angiotensin-converting Enzyme 2
Molecule annotation
3
Spike Glycoprotein
Molecule annotation
Chemicals and Non-standard biopolymers (84 molecules)
1
75
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
6
beta-D-mannopyranosebeta-D-mannopyranose
3
3
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303