8XW8: Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate and fructose 1,6-bisphosphate and GDP

PDB ID: 8XW8Download
MMDB ID: 250463
PDB Deposition Date: 2024/1/16
Updated in MMDB: 2024/08
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 8XW8: tetrameric; determined by author and by software (PISA)
Molecular Components in 8XW8
Label Count Molecule
Proteins (4 molecules)
4
Pyruvate Kinase
(Gene symbol: pykF)
Molecule annotation
Chemicals and Non-standard biopolymers (28 molecules)
1
6
MAGNESIUM IONMAGNESIUM ION
2
4
POTASSIUM IONPOTASSIUM ION
3
4
1,6-di-O-phosphono-beta-D-fructofuranose1,6-di-O-phosphono-beta-D-fructofuranose
4
4
GUANOSINE-5'-DIPHOSPHATEGUANOSINE-5'-DIPHOSPHATE
5
4
OXALATE IONOXALATE ION
6
6
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303