8XMM: Voltage-gated sodium channel Nav1.7 variant M9

PDB ID: 8XMMDownload
MMDB ID: 243852
PDB Deposition Date: 2023/12/27
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 2.89  Å
Source Organism:
Similar Structures:
Biological Unit for 8XMM: dimeric; determined by author
Molecular Components in 8XMM
Label Count Molecule
Proteins (2 molecules)
1
Sodium Channel Protein Type 9 Subunit Alpha
(Gene symbol: SCN9A)
Molecule annotation
1
Sodium Channel Subunit Beta-1
(Gene symbol: SCN1B)
Molecule annotation
Chemicals and Non-standard biopolymers (28 molecules)
1
10
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
CHOLESTEROLCHOLESTEROL
3
9
1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
4
1
(2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate(2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate
5
6
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
6
1
O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serineO-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303