8XKU: Cryo-EM structure of the Ycf2-FtsHi motor complex from Arabidopsis in ATP-bound state

PDB ID: 8XKUDownload
MMDB ID: 252228
PDB Deposition Date: 2023/12/24
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8XKU: heptadecameric; determined by author
Molecular Components in 8XKU
Label Count Molecule
Proteins (17 molecules)
1
Probable Inactive Atp-dependent Zinc Metalloprotease Ftshi 4, Chloroplastic
(Gene symbol: EMB3144)
Molecule annotation
1
Atp-dependent Zinc Metalloprotease Ftsh 12, Chloroplastic
(Gene symbol: FTSH12)
Molecule annotation
1
Probable Inactive Atp-dependent Zinc Metalloprotease Ftshi 5, Chloroplastic
(Gene symbol: emb2458)
Molecule annotation
1
Protein Ycf2
(Gene symbol: ycf2)
Molecule annotation
1
Probable Inactive Atp-dependent Zinc Metalloprotease Ftshi 1, Chloroplastic
(Gene symbol: FtsHi1)
Molecule annotation
1
Probable Inactive Atp-dependent Zinc Metalloprotease Ftshi 2, Chloroplastic
(Gene symbol: EMB2083)
Molecule annotation
1
Attam46
Molecule annotation
1
At4g28210
Molecule annotation
2
Malate Dehydrogenase, Chloroplastic
(Gene symbol: MDH)
Molecule annotation
1
Aspartyl/glutamyl-trna (Asn/gln) Amidotransferase Subunit B
Molecule annotation
1
UNK
Molecule annotation
1
UNK
Molecule annotation
1
UNK
Molecule annotation
1
UNK
Molecule annotation
1
UNK
Molecule annotation
1
Embryo Defective 2737
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
2
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
3
ZINC IONZINC ION
4
1
1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303